Matrix | HOMSTRAD (Pairwise only) | |||
---|---|---|---|---|
Method | 0-15% (25) | 15-30% (207) | 30-45% (173) | All (630) |
PAM250 | Â | Â | Â | Â |
MTRAP | 0.421 | 0.655 | 0.874 | 0.817 |
Needle | 0.226 | 0.548 | 0.837 | 0.763 |
ClustalW2 | 0.234 | 0.528 | 0.817 | 0.747 |
BLOSUM62 | Â | Â | Â | Â |
MTRAP | 0.410 | 0.653 | 0.878 | 0.817 |
Needle | 0.223 | 0.556 | 0.843 | 0.768 |
ClustalW2 | 0.276 | 0.585 | 0.861 | 0.784 |
GONNET250* | Â | Â | Â | Â |
MTRAP | 0.412 | 0.659 | 0.879 | 0.819 |
ClustalW2 | 0.313 | 0.619 | 0.867 | 0.800 |