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Table 5 Neuroblastoma data: Top ranked by set size bootstrap 95% upper confidence limit (UCL) for the variance and standard deviation of the log geometric mean (GM).

From: Selection of optimal reference genes for normalization in quantitative RT-PCR

Set Size(*)

AC1

B2M

GA2

HM3

HP4

RP5

SD6

TBP

UBC

YW7

95% UCL Var(GM)

95% UCL StdDev(GM)

1

0

0

1

0

0

0

0

0

0

0

0.458

0.677

2

0

0

1

0

0

0

0

0

0

1

0.340

0.583

3

1

0

1

0

0

0

0

0

0

1

0.340

0.583

4

1

1

1

0

0

0

0

1

0

0

0.303

0.550

5

1

1

1

0

1

1

0

0

0

0

0.299

0.547

6

1

1

1

0

1

0

0

1

0

1

0.298

0.546

7

1

1

1

0

1

1

0

1

0

1

0.303

0.550

8

1

1

1

0

1

1

1

1

0

1

0.317

0.563

9

1

1

1

1

1

1

1

1

0

1

0.334

0.578

10

1

1

1

1

1

1

1

1

1

1

0.353

0.594

  1. (*) in the column with gene name, 1 indicates that the corresponding gene is included in the subset and 0 that it is not included
  2. 1AC - ACTB; 2GA - GAPDH; 3HM - HMBS; 4HP - HPRT1; 5RP - RPL13A; 6SD - SDHA; 7YW - YWHAZ