Table 1 Chem2Bio2RDF datasets: some data sources map to multiple RDF resources.
Database | Resource name | Number of RDF triples |
|---|---|---|
PubChem Compound | compound | 233852 |
PubChem BioAssay | pubchem_bioassay | 1715247 |
ChEBI | chebi | 2237330 |
KEGG | kegg_ligand | 96000 |
KEGG | kegg_interaction | 70029 |
KEGG | kegg_pathway_protein | 84760 |
CTD | ctd_interaction | 2443826 |
CTD | ctd_chem_disease | 2025513 |
BindingDB | bindingdb_ligand | 223818 |
BindingDB | bindingdb_interaction | 800016 |
PharmGKB | pharmgkb_drugs | 14760 |
PharmGKB | Pharmgkb_genes | 340808 |
PharmGKB | pharmgkb_relations | 73276 |
PharmGKB | pharmgkb_diseases | 9591 |
DrugBank | drugbank_drug | 47640 |
DrugBank | drugbank_interaction | 111001 |
Public QSAR sets | qsar | 27269 |
MATADOR | matador | 253488 |
UNIPROT | uniprot | 34951 |
HPRD | hprd | 408177 |
Reactome | reactome | 21985 |
DIP | dip | 1113840 |
OMIM | omim | 23432 |
SIDER | sider | 305510 |
PubMed | pubmed2compound | 269178 |