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Table 2 miRNAs predicted to be up-regulated in Macrophage cells treated with LPS

From: Detecting microRNA activity from gene expression data

Predicted miRNAs

Rank with PicTar4way

Rank with PicTar5way

Rank with TargetScan

Rank with TargetScanS

Rank with miRanda

Average rank

WT macrophages

      

miR-369/3p/5p

2

4

10

1

 

4.25

miR-155

5

1

7

7

 

5

miR-374

  

12

 

2

7

miR-126

15

14

2

2

 

8.25

miR-34/b/c

 

15

 

12

5

10.66

miR-33

20

5

  

8

11

miR-26/a

11

16

18

3

 

11.25

miR-18a

 

9

  

20

14.5

MALKO macrophages

      

miR-126

2

2

1

1

 

1.5

miR-155

3

3

6

3

 

3.75

miR-33

8

6

  

7

7

miR-26/a

13

  

4

 

8.5

miR-369/3p/5p

 

20

11

2

11

11

miR-34/b/c

19

  

13

14

15.33

miR-18a

 

15

  

18

16.5

miR-374

  

18

 

20

19

  1. Experimentally verified miRNAs are in bold