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Figure 6 | BMC Bioinformatics

Figure 6

From: CNstream: A method for the identification and genotyping of copy number polymorphisms using Illumina microarrays

Figure 6

Quantitative PCR results. (a) ΔΔC T values for 20 individuals for the TUSC3 locus, which clearly validate the deletions assigned by CNstream (red bars) versus the 2-copy samples (blue bars). (b) ΔΔCt values for the 20 individuals analyzed for the PLEC1 locus demonstrate no differences between those that were called with a deletion (in blue) and those that were called as 2-copy samples (in red) by PennCNV.

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