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Table 1 Number of protein genes with annotated/predicted function.

From: Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP

Organism

Total

Annotated a)

Predicted with high confidence (≥ 0.8)

Predicted with medium confidence ≥ 0.6

Predicted with low confidence ≥ 0.4

Previously annotated and predicted with high confidence (≥ 0.8)

E. coli K-12

4381

3646 (83.2%)

523

696

733

4169 (95.2%)

S. cerevisiae

6690

5496 (82.2%)

932

1116

1187

6428 (96.1%)

P. falciparum

5270

2209 (41.9%)

2575

3025

3060

4784 (90.8%)

  1. In the parentheses, the percentage of the genes relative to the total number of genes in the genome is shown.
  2. a) The number of genes with function annotation in the GOA database.