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Table 1 Transcription factors and their Jaspar target matrices.

From: A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes

Experiment Name TF Name JasparClass Jaspartarget matrices
E-GEOD-10954 cMyc bHLH-ZIP MYC-MAX, MAX, Mycn
E-GEOD-11039 e2f2 E2F_TDP E2F1
E-GEOD-11352 ESRalpha Nuclear Receptor ESR1
E-GEOD-11809 irf1 TRP-CLUSTER IRF1 IRF2
E-GEOD-2060 CREB bZIP CREB1, bZIP910, bZIP911
E-GEOD-2192 PPARg2 Nuclear Receptor PPARG-RXRA, PPARG
E-GEOD-2527 Gata-1 ZN-FINGER, GATA Gata1
E-GEOD-3126 HNF4a NUCLEAR RECEPTOR HNF4A
E-GEOD-3244 p53 TP53 P53
E-GEOD-6077 nmyc bHLH-ZIP Mycn, MYC-MAX, MAX
E-GEOD-6487 Myf bHLH Myf
E-GEOD-7137 KLF15 ZN-FINGER, C2H2 Klf4
E-GEOD-7219 NFkappaB2 REL NF-kappaB, NFKB1
E-GEOD-7223 AIbZIP bZIP CREB1, bZIP910, bZIP911
E-GEOD-7835 HiF1 bHLH Arnt, Arnt-Ahr
E-GEOD-9786 PPARalpha Nuclear Receptor PPARG, PPARG-RXRA
E-MEXP-1444 Cepba bZIP Cebpa, Ddit3-Cebpa
E-MEXP-634 Gata-3 ZN-FINGER, GATA GATA3
E-GEOD-590 USF1 Zipper USF1
E-GEOD-5800 Irf6 TRP-CLUSTER IRF1 IRF2
E-GEOD-5823 c-MYC bHLH-ZIP Mycn, MYC-MAX, MAX
E-GEOD-2624 NF-kB REL NF-kappaB, NFKB1
E-GEOD-3116 HNF4 NUCLEAR RECEPTOR HNF4A
E-GEOD-5424 Foxa2 Forkhead FOXF2, FOXD1, FOXC1, FOXL1, Foxq1, Foxd3, Foxa2, FOXI1
E-GEOD-8943 FOXQ1 Forkhead FOXF2, FOXD1, FOXC1, FOXL1, Foxq1, Foxd3, Foxa2, FOXI1
E-GEOD-11557 Evi-1 zinc finger Evi1
E-TABM-43 TP53 TP53 P53
E-GEOD-2815 Myb Helix-Turn-Helix Myb
E-GEOD-5475 PPARI Nuclear Receptor PPARG, PPARG-RXRA
E-GEOD-6846 STAT2 stat STAT1
E-GEOD-11836 Nkx3.1 HOMEO Nkx2-5
E-MEXP-871 HMGA2 - HMG-1, HMG-IY
E-MEXP-1413 E2F2 E2F TDP E2F1