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Figure 4 | BMC Bioinformatics

Figure 4

From: sdef: an R package to synthesize lists of significant features in related experiments

Figure 4

T ( h ) and R ( h ) for the illustrative example on three lists. The figure shows a) the plot of T(h) (ratio function) and b) the plot of R(h) and its credibility interval (baymod function) on the mice data described in the section "Illustrative analysis: molecular similarities between mammalian sexes" (three lists). The p-values are on the x-axis; the left y-axis shows T(h) or R(h), while the right y-axis shows the number of genes in common for some values of T(h) or R(h). Both approaches return a list of 110 features in common for a threshold h max = 0.12. Note that since R(h max ) < 2 there is no R2 in this example.

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