From: A comparison of probe-level and probeset models for small-sample gene expression data
 | HGU95A | HGU133A | Golden Spike | ||||
---|---|---|---|---|---|---|---|
 | 4 × 4 | 3 × 3s | 2 × 2s | 3 × 3 | 2 × 2s | 3 × 3 | 2 × 2s |
NFM | 0.9991 | 0.9979 | 0.9907 | 0.9080 | 0.8989 | 0.7705 | 0.7618 |
PLM1 | 0.9994 | 0.9988 | 0.9960 | 0.8604 | 0.8531 | 0.8809 | 0.8806 |
PLM2 | 0.9994 | 0.9988 | 0.9959 | 0.8607 | 0.8549 | 0.8794 | 0.8783 |
LE | 0.9985 | 0.9892 | 0.9702 | 0.8165 | 0.8076 | 0.8213 | 0.8582 |
PL-LM | 0.9920 | 0.9873 | 0.9744 | 0.8356 | 0.8227 | 0.8075 | 0.7480 |
PLW | 0.9988 | 0.9859 | 0.9762 | 0.8473 | 0.8294 | 0.8795 | 0.8918 |
FC | 0.9801 | 0.9713 | 0.9616 | 0.8006 | 0.8004 | 0.8871 | 0.8868 |
RMANOVA1 | 0.4838 | 0.4356 | 0.3864 | 0.7273 | 0.7066 | 0.1616 | 0.1319 |
RMANOVA2 | 0.7556 | 0.7712 | 0.6028 | 0.7867 | 0.7849 | 0.7468 | 0.6299 |
FIRSTP | 0.9725 | 0.9611 | 0.9282 | 0.8500 | 0.8347 | 0.8135 | 0.8680 |
PUMA | 0.9435 | 0.9276 | 0.9019 | 0.9133 | 0.9143 | 0.7901 | 0.7769 |