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Table 1 Number of DGCr1 clones and assigned fold change for each PCR pool.

From: Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset

pool
name
Number of
clones
Number of assigned
probe sets*
Relative amount
in A
Relative amount
in B
Designated fold
change (A vs B)
1 170 161 1 1.2 0.83
2 192 196 2 1 2.00
3 192 181 1.5 1 1.50
4 192 177 1 2.5 0.40
5 187 176 1 1 1.00
6 116 104 3 1 3.00
7 192 202 3.5 1 3.50
8 192 204 1 1.5 0.67
9 192 204 1 4 0.25
10 192 192 1.7 1 1.70
11a 192 200 1 1 1.00
12a 121 123 1 1 1.00
13a 192 195 1 1 1.00
14a 192 197 1 1 1.00
15a 192 203 1 1 1.00
16a 191 191 1 1 1.00
17a 139 141 1 1 1.00
18a 192 193 1 1 1.00
19a 192 186 1 3.5 0.29
11b 191 197 1 1 1.00
12b 223 225 1 1 1.00
13b 237 246 1 1 1.00
14b 288 302 1 1 1.00
15b 288 303 1 1 1.00
16b 288 292 1 1 1.00
17b 288 300 1 1 1.00
18b 250 243 1 1 1.00
19b 265 274 3.5 1 3.50
  1. *There are 202, 15 and 1 probe sets assigned to clones present in two, three and four different pools respectively.