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Table 4 Distance to nearest positive triads and negative triads of misclassified positive triads.

From: Predicting the network of substrate-enzyme-product triads by combining compound similarity and functional domain composition

Substrates

Enzymes

Products

Distance

Differences

   

Positive triads

Negative triads

 

C00002

YIL139C

C06397

0.24

0.19125

0.04875

C00002

YPL271W

C00008

0.25

0.22125

0.02875

C00002

YPR033C

C00020

0.1

0.03375

0.06625

C00003

YKR066C

C00004

0.25

0.225

0.025

C00003

YPR167C

C00004

0.25

0.177831

0.072169

C00010

YER090W

C00024

0.25

0.1125

0.1375

C00010

YER178W

C00024

0.189188

0.1425

0.046688

C00024

YAL054C

C00033

0.21

0.199626

0.010374

C00024

YCL030C

C06548

0.25

0.0975

0.1525

C00024

YLR153C

C00033

0.21

0.199626

0.010374

C00025

YHR037W

C03912

0.375

0.202643

0.172357

C00026

YIR034C

C00449

0.271688

0.25

0.021688

C00035

YGL047W

C00096

0.1875

0.165

0.0225

C00037

YOL049W

C00051

0.48375

0.25

0.23375

C00047

YPL096W

C12989

0.25

0.225

0.025

C00055

YBL013W

C04121

0.177831

0.12375

0.054081

C00055

YDR410C

C04121

0.25

0.22125

0.02875

C00055

YKR069W

C04121

0.25

0.19125

0.05875

C00065

YBR263W

C00143

0.375

0.25

0.125

C00065

YLR058C

C00143

0.375

0.25

0.125

C00083

YPL231W

C12647

0.073223

0.02625

0.046973

C00085

YKL104C

C00352

0.25

0.2325

0.0175

C00086

YIR029W

C00499

0.4525

0.375

0.0775

C00096

YBR252W

C00144

0.25

0.12

0.13

C00096

YGR036C

C00636

0.25

0.24375

0.00625

C00108

YDR354W

C04302

0.375

0.2325

0.1425

C00109

YCL018W

C06032

0.383376

0.36625

0.017126

C00118

YGL026C

C03506

0.375

0.37375

0.00125

C00143

YGL125W

C00440

0.3025

0.28375

0.01875

C00155

YNL256W

C01118

0.25

0.22125

0.02875

C00167

YJR131W

C00191

0.25

0.21

0.04

C00191

YOR065W

C05787

0.25

0.19875

0.05125

C00223

YDR062W

C12096

0.0825

0.082244

0.000256

C00223

YMR296C

C12096

0.0825

0.04875

0.03375

C00234

YDR408C

C04376

0.36625

0.32125

0.045

C00333

YJR153W

C00470

0.375

0.12375

0.25125

C00448

YDL205C

C16144

0.225

0.19125

0.03375

C00582

YHL003C

C05598

0.25

0.1875

0.0625

C00582

YKL008C

C05598

0.25

0.1875

0.0625

C00632

YDR120C

C05831

0.25

0.15

0.1

C00652

YML086C

C06316

0.565

0.36625

0.19875

C00842

YDR127W

C06017

0.1125

0.09

0.0225

C00864

YDR531W

C03492

0.25125

0.25

0.00125

C00931

YDL205C

C01024

0.59625

0.375

0.22125

C01063

YBL015W

C09813

0.1275

0.1125

0.015

C01079

YDR044W

C03263

0.41875

0.25

0.16875

C01096

YCL030C

C02888

0.25

0.22875

0.02125

C01100

YIL116W

C01267

0.375

0.25

0.125

C01902

YML008C

C08830

0.375

0.25

0.125

C02411

YGR155W

C03058

0.09

0.075

0.015

C02909

YHR007C

C14098

0.25

0.195

0.055

C03012

YDR402C

C11713

0.36375

0.2575

0.10625

C03598

YPR167C

C04297

0.25

0.1875

0.0625

C04751

YAR015W

C04823

0.34

0.32875

0.01125

C04874

YDR452W

C05925

0.16875

0.125

0.04375

C06102

YLR231C

C06105

0.535

0.25

0.285

C06397

YBR029C

C07838

0.18375

0.17625

0.0075

C06599

YNL202W

C06600

0.147938

0.113376

0.034562

C06714

YDR127W

C06723

0.0975

0.08625

0.01125

C07649

YDR402C

C12673

0.55

0.3625

0.1875

C07732

YGR234W

C07733

0.3075

0.25

0.0575

C09811

YGL063W

C09812

0.1125

0.10125

0.01125

C11907

YPR118W

C11908

0.25

0.22875

0.02125

C11923

YFR015C

C12384

0.25

0.03

0.22

C11923

YLR258W

C12384

0.25

0.03

0.22

C14082

YHR007C

C14089

0.25

0.195

0.055

C15786

YGR060W

C15797

0.09375

0.08625

0.0075