Table 5 Top 30 protein atom type triangles ranked by their binding site enrichment factor F b .
From: An interaction-motif-based scoring function for protein-ligand docking
Rank | Triangle | F b | Coverage%* (binding site) | Coverage%* (whole protein) |
|---|---|---|---|---|
1 | NLC-NLC-NLC | 70.6 | 13.2 | 93.7 |
2 | CRP-CRP-CRP | 61.9 | 23.3 | 96.6 |
3 | CRP-NLC-NLC | 47.2 | 16.6 | 98.0 |
4 | CRP-CRP-NLC | 44.3 | 20.1 | 97.7 |
5 | CRP-CRP-OLC | 38.1 | 22.6 | 98.3 |
6 | NLC-NLC-NRE | 32.8 | 8.2 | 95.7 |
7 | CRP-CRP-NRE | 31.7 | 16.8 | 93.6 |
8 | CRP-CRP-O3B | 29.8 | 26.4 | 98.2 |
9 | NLC-NLC-O3B | 29.6 | 16.3 | 98.6 |
10 | CRP-CRP-NLB | 26.2 | 19.8 | 98.1 |
11 | CRN-CRP-CRP | 26.2 | 32.4 | 98.5 |
12 | CRP-OLC-OLC | 25.8 | 21.0 | 98.8 |
13 | NLB-NLC-NLC | 24.6 | 20.3 | 98.9 |
14 | CRP-NRE-OLC | 23.5 | 15.4 | 97.6 |
15 | CRP-NLC-O3B | 23.5 | 19.1 | 98.3 |
16 | CRP-NLC-NRE | 23.0 | 12.1 | 96.9 |
17 | NRE-OLC-OLC | 19.9 | 12.5 | 97.9 |
18 | CRP-NRE-NRE | 19.7 | 9.0 | 89.4 |
19 | CRP-NLB-NLC | 19.2 | 17.2 | 98.3 |
20 | NLC-O3B-O3B | 18.6 | 14.2 | 98.5 |
21 | NRE-NRE-OLC | 18.1 | 8.3 | 96.7 |
22 | CRN-NLC-NLC | 17.5 | 17.4 | 98.6 |
23 | NRE-NRE-NRE | 17.3 | 4.2 | 77.3 |
24 | OLC-OLC-OLC | 17.0 | 13.0 | 98.4 |
25 | CRP-NLC-OLC | 17.0 | 15.9 | 98.3 |
26 | CRN-CRN-CRN | 16.9 | 41.4 | 99.0 |
27 | CRP-CRP-S3N | 16.8 | 5.3 | 93.6 |
28 | NLC-NRE-NRE | 16.7 | 6.1 | 94.2 |
29 | CRN-CRN-CRP | 16.5 | 37.6 | 98.9 |
30 | C3P-NLC-NLC | 16.2 | 33.5 | 98.9 |