TY - CHAP AU - Tretyakov, K. PY - 2006 DA - 2006// BT - Methods of genomic data fusion: An overview ID - Tretyakov2006 ER - TY - CHAP AU - Vapnik, V. PY - 1995 DA - 1995// BT - The Nature of Statistical Learning Theory PB - Springer-Verlag CY - New York UR - https://doi.org/10.1007/978-1-4757-2440-0 DO - 10.1007/978-1-4757-2440-0 ID - Vapnik1995 ER - TY - CHAP AU - Shawe-Taylor, J. AU - Cristianini, N. PY - 2004 DA - 2004// BT - Kernel methods for pattern analysis PB - Cambridge University Press CY - Cambridge UR - https://doi.org/10.1017/CBO9780511809682 DO - 10.1017/CBO9780511809682 ID - Shawe-Taylor2004 ER - TY - JOUR AU - Lanckriet, G. R. G. AU - Cristianini, N. AU - Bartlett, P. AU - Ghaoui, L. E. AU - Jordan, M. I. PY - 2005 DA - 2005// TI - Learning the Kernel Matrix with Semidefinite Programming JO - Journal of Machine Learning Research VL - 5 ID - Lanckriet2005 ER - TY - CHAP AU - Bach, F. R. AU - Lanckriet, G. R. G. AU - Jordan, M. I. PY - 2004 DA - 2004// TI - Multiple kernel learning, conic duality, and the SMO algorithm BT - Proceedings of 21st International Conference of Machine Learning ID - Bach2004 ER - TY - JOUR AU - Lanckriet, G. R. G. AU - De Bie, T. AU - Cristianini, N. AU - Jordan, M. I. AU - Noble, W. S. PY - 2004 DA - 2004// TI - A statistical framework for genomic data fusion JO - Bioinformatics VL - 20 UR - https://doi.org/10.1093/bioinformatics/bth294 DO - 10.1093/bioinformatics/bth294 ID - Lanckriet2004 ER - TY - JOUR AU - De Bie, T. AU - Tranchevent, L. C. AU - Van Oeffelen, L. AU - Moreau, Y. PY - 2007 DA - 2007// TI - Kernel-based data fusion for gene prioritization JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm187 DO - 10.1093/bioinformatics/btm187 ID - De Bie2007 ER - TY - CHAP AU - Ng, A. Y. PY - 2004 DA - 2004// TI - Feature selection, L1 vs. L2 regularization, and rotational invariance BT - Proceedings of 21st International Conference of Machine Learning ID - Ng2004 ER - TY - CHAP AU - Kloft, M. AU - Brefeld, U. AU - Sonnenburg, S. AU - Laskov, P. AU - Müller, K. AU - Zien, A. PY - 2009 DA - 2009// TI - Efficient and Accurate Lp-norm Multiple Kernel Learning BT - Advances in Neural Information Processing Systems 22 ID - Kloft2009 ER - TY - CHAP AU - Grant, M. AU - Boyd, S. PY - 2010 DA - 2010// BT - CVX: Matlab Software for Disciplined Convex Programming, version 1.21 ID - Grant2010 ER - TY - CHAP AU - Grant, M. AU - Boyd, S. ED - Blondel, V. ED - Boyd, S. ED - Kimura, H. PY - 2008 DA - 2008// TI - Graph implementations for nonsmooth convex programs BT - Recent Advances in Learning and Control Lecture Notes in Control and Information Sciences ID - Grant2008 ER - TY - JOUR AU - Tax, D. M. J. AU - Duin, R. P. W. PY - 1999 DA - 1999// TI - Support vector domain description JO - Pattern Recognition Letter VL - 20 UR - https://doi.org/10.1016/S0167-8655(99)00087-2 DO - 10.1016/S0167-8655(99)00087-2 ID - Tax1999 ER - TY - JOUR AU - Schölkopf, B. AU - Platt, J. C. AU - Shawe-Taylor, J. AU - Smola, A. J. AU - Williamson, R. C. PY - 2001 DA - 2001// TI - Estimating the support of a high-dimensional distribution JO - Neural Computation VL - 13 UR - https://doi.org/10.1162/089976601750264965 DO - 10.1162/089976601750264965 ID - Schölkopf2001 ER - TY - STD TI - Sedumi[http://sedumi.ie.lehigh.edu/] UR - http://sedumi.ie.lehigh.edu/ ID - ref14 ER - TY - CHAP AU - Andersen, E. D. AU - Andersen, K. D. PY - 2000 DA - 2000// TI - The MOSEK interior point optimizer for linear programming: an implementation of the homogeneous algorithm BT - High Perf Optimization UR - https://doi.org/10.1007/978-1-4757-3216-0_8 DO - 10.1007/978-1-4757-3216-0_8 ID - Andersen2000 ER - TY - CHAP AU - Kim, S. J. AU - Magnani, A. AU - Boyd, S. PY - 2006 DA - 2006// TI - Optimal kernel selection in kernel fisher discriminant analysis BT - Proceeding of 23rd International Conference of Machine Learning ID - Kim2006 ER - TY - JOUR AU - Ye, J. P. AU - Ji, S. H. AU - Chen, J. H. PY - 2008 DA - 2008// TI - Multi-class discriminant kernel learning via convex programming JO - Journal of Machine Learning Research VL - 40 ID - Ye2008 ER - TY - JOUR AU - Sonnenburg, S. AU - Rätsch, G. AU - Schäfer, C. AU - Schölkopf, B. PY - 2006 DA - 2006// TI - Large scale multiple kernel learning JO - Journal of Machine Learning Research VL - 7 ID - Sonnenburg2006 ER - TY - JOUR AU - Hettich, R. AU - Kortanek, K. O. PY - 1993 DA - 1993// TI - Semi-infinite programming: theory, methods, and applications JO - SIAM Review VL - 35 UR - https://doi.org/10.1137/1035089 DO - 10.1137/1035089 ID - Hettich1993 ER - TY - STD TI - Kaliski J, Haglin D, Roos C, Terlaky T: Logarithmic barrier decomposition methods for semi-infinite programming. International Transactions in Operations Research 4(4): ID - ref20 ER - TY - JOUR AU - Reemtsen, R. PY - 1994 DA - 1994// TI - Some other approximation methods for semi-infinite optimization problems JO - Jounral of Computational and Applied Mathematics VL - 53 UR - https://doi.org/10.1016/0377-0427(92)00122-P DO - 10.1016/0377-0427(92)00122-P ID - Reemtsen1994 ER - TY - CHAP AU - Suykens, J. A. K. AU - Van Gestel, T. AU - Brabanter, J. AU - De Moor, B. AU - Vandewalle, J. PY - 2002 DA - 2002// BT - Least Squares Support Vector Machines PB - World Scientific Publishing CY - Singapore ID - Suykens2002 ER - TY - CHAP AU - Veropoulos, K. AU - N, C. AU - C, C. PY - 1999 DA - 1999// TI - Controlling the sensitivity of support vector machines BT - Proc of the IJCAI 99 ID - Veropoulos1999 ER - TY - CHAP AU - Zheng, Y. AU - Yang, X. AU - Beddoe, G. PY - 2007 DA - 2007// TI - Reduction of False Positives in Polyp Detection Using Weighted Support Vector Machines BT - Proc. of the 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) ID - Zheng2007 ER - TY - JOUR AU - Suykens, J. A. K. AU - De Brabanter, J. AU - Lukas, L. AU - Vandewalle, J. PY - 2002 DA - 2002// TI - Weighted least squares support vector machines : robustness and sparse approximation JO - Neurocomputing, Special issue on fundamental and information processing aspects of neurocomputing VL - 48 ID - Suykens2002 ER - TY - CHAP AU - Cawley, G. C. PY - 2006 DA - 2006// TI - Leave-One-Out Cross-Validation Based Model Selection Criteria for Weighted LS-SVMs BT - Proc. of 2006 International Joint Conference on Neural Networks ID - Cawley2006 ER - TY - JOUR AU - Aerts, S. AU - Lambrechts, D. AU - Maity, S. AU - Van Loo, P. AU - Coessens, B. AU - De Smet, F. AU - Tranchevent, L. C. AU - De Moor, B. AU - Marynen, P. AU - Hassan, B. AU - Carmeliet, P. AU - Moreau, Y. PY - 2006 DA - 2006// TI - Gene prioritization through genomic data fusion JO - Nature Biotechnology VL - 24 UR - https://doi.org/10.1038/nbt1203 DO - 10.1038/nbt1203 ID - Aerts2006 ER - TY - JOUR AU - Yu, S. AU - Van Vooren, S. AU - Tranchevent, L. C. AU - De Moor, B. AU - Moreau, Y. PY - 2008 DA - 2008// TI - Comparison of vocabularies, representations and ranking algorithms for gene prioritization by text mining JO - Bioinformatics VL - 24 UR - https://doi.org/10.1093/bioinformatics/btn291 DO - 10.1093/bioinformatics/btn291 ID - Yu2008 ER - TY - CHAP AU - Leslie, C. AU - Eskin, E. AU - Weston, J. AU - Noble, W. S. PY - 2002 DA - 2002// TI - The spectrum kernel: a string kernel for SVM protein classification BT - Proc. of the Pacific Symposium on Biocomputing 2002 ID - Leslie2002 ER - TY - JOUR AU - Eeles, R. A. AU - Kote-Jarai, Z. AU - Giles, G. G. AU - Olama, A. A. A. AU - Guy, M. AU - Jugurnauth, S. K. AU - Mulholland, S. AU - Leongamornlert, D. A. AU - Edwards, S. M. AU - Morrison, J. e. a. PY - 2008 DA - 2008// TI - Multiple newly identified loci associated with prostate cancer susceptibility JO - Nat Genet VL - 40 UR - https://doi.org/10.1038/ng.90 DO - 10.1038/ng.90 ID - Eeles2008 ER - TY - JOUR AU - Thomas, G. AU - Jacobs, K. B. AU - Yeager, M. AU - Kraft, P. AU - Wacholder, S. AU - Orr, N. AU - Yu, K. AU - Chatterjee, N. AU - Welch, R. AU - Hutchinson, A. e. a. PY - 2008 DA - 2008// TI - Multiple loci identified in a genome-wide association study of prostate cancer JO - Nat Genet VL - 40 UR - https://doi.org/10.1038/ng.91 DO - 10.1038/ng.91 ID - Thomas2008 ER - TY - JOUR AU - Gudmundsson, J. AU - Sulem, P. AU - Rafnar, T. AU - Bergthorsson, J. T. AU - Manolescu, A. AU - Gudbjartsson, D. AU - Agnarsson, B. A. AU - Sigurdsson, A. AU - Benediktsdottir, K. R. AU - Blondal, T. e. a. PY - 2008 DA - 2008// TI - Common sequence variants on 2p15 and Xp11.22 confer susceptibility to prostate cancer JO - Nat Genet VL - 40 UR - https://doi.org/10.1038/ng.89 DO - 10.1038/ng.89 ID - Gudmundsson2008 ER - TY - JOUR AU - Daemen, A. AU - Gevaert, O. AU - Ojeda, F. AU - Debucquoy, A. AU - Suykens, J. A. K. AU - Sempous, C. AU - Machiels, J. P. AU - Haustermans, K. AU - De Moor, B. PY - 2009 DA - 2009// TI - A kernel-based integration of genome-wide data for clinical decision support JO - Genome Medicine VL - 1 UR - https://doi.org/10.1186/gm39 DO - 10.1186/gm39 ID - Daemen2009 ER - TY - CHAP AU - Daemen, A. AU - De Moor, B. PY - 2009 DA - 2009// TI - Development of a kernel function for clinical data BT - Proc. of the 31th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) ID - Daemen2009 ER - TY - CHAP AU - van den Bosch, T. AU - Daemen, A. AU - Gevaert, O. AU - Timmerman, D. PY - 2007 DA - 2007// TI - Mathematical decision trees versus clinician based algorithms in the diagnosis of endometrial disease BT - Proc. of the 17th World Congress on Ultrasound in Obstetrics and Gynecology (ISUOG) ID - van den Bosch2007 ER - TY - JOUR AU - Bottomley, C. AU - Daemen, A. AU - Mukri, F. AU - Papageorghiou, A. T. AU - Kirk, E. AU - A, P. AU - De Moor, B. AU - Timmerman, D. AU - Bourne, T. PY - 2007 DA - 2007// TI - Functional linear discriminant analysis: a new longitudinal approach to the assessment of embryonic growth JO - Human Reproduction VL - 24 UR - https://doi.org/10.1093/humrep/den382 DO - 10.1093/humrep/den382 ID - Bottomley2007 ER - TY - JOUR AU - Gevaert, O. AU - De Smet, F. AU - Timmerman, D. AU - Moreau, Y. AU - De Moor, B. PY - 2006 DA - 2006// TI - Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/btl230 DO - 10.1093/bioinformatics/btl230 ID - Gevaert2006 ER - TY - JOUR AU - Condous, G. AU - Okaro, E. AU - Khalid, A. AU - Timmerman, D. AU - Lu, C. AU - Zhou, Y. AU - Van Huffel, S. AU - Bourne, T. PY - 2004 DA - 2004// TI - The use of a new logistic regression model for predicting the outcome of pregnancies of unknown location JO - Human Reproduction VL - 21 ID - Condous2004 ER - TY - STD TI - Moult J, Fidelis K, Kryshtafovych A, Rost B, Tramontano A: Critical assessment of methods of protein structure prediction - Round VIII. Proteins: Structure, Function, and Bioinformatics 77(S9): ID - ref39 ER - TY - CHAP AU - Kloft, M. AU - Brefeld, U. AU - Laskov, P. AU - Sonnenburg, S. PY - 2008 DA - 2008// TI - Non-sparse multiple kernel learning BT - NIPS 08 workshop: kernel learning automatic selection of optimal kernels ID - Kloft2008 ER - TY - CHAP AU - Kowalski, M. AU - Szafranski, M. AU - Ralaivola, L. PY - 2009 DA - 2009// TI - Multiple indefinite kernel learning with mixed norm regularization BT - Proc of the 26th International Conference of Machine Learning ID - Kowalski2009 ER -