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Figure 1 | BMC Bioinformatics

Figure 1

From: Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates

Figure 1

Local similarity estimation. The diagonal corresponds to the shift value h providing the best match between the region of sequence Q and sequence D. A mn is the summarized similarity of superposed areas of sequences Q and D terminated at q m and d n+h , respectively. Thus, the score R i = A ih - A i-F, h , presents the highest similarity score being found for the selected region of sequence Q. Finally, the similarity score S i takes the maximal values from R i+j scores.

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BMC Bioinformatics

ISSN: 1471-2105

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