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Table 1 Designations and descriptions of kinases whose substrates were included into the training set

From: Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates

Kinase type

Description

Lmin

Lmax

ABL1

Proto-oncogene tyrosine-protein kinase

178

1271

ATM

Ataxia telangiectasia mutated

118

3056

AURORA_A

Serine/threonine-protein kinase 6 (STK6)

136

1863

AURORA_B

Serine/threonine-protein kinase 12 (AURKB)

136

923

CAM_KII_group

Calcium/calmodulin-dependent protein kinase II

52

5037

CAM_KII_alpha

Calcium/calmodulin-dependent protein kinase II alpha

52

4967

CDK1

Cell division control protein 2 homolog (Cyclin-dependent kinase 1)

107

4684

CDK2

Cell division protein kinase 2

119

1971

CDKgroup

Cyclin-dependent kinases

149

1863

CK1alpha

Casein kinase 1, alpha

140

911

CK1group

Casein kinases 1

195

2843

CK2group

Casein kinase 2

98

2346

DNA_PK

DNA-dependent protein kinase catalytic subunit

270

4128

EGFR

Epidermal growth factor receptor (Receptor tyrosine-protein kinase ErbB-1)

76

1291

ERK2

Mitogen-activated protein kinase 1

196

2225

ERK1

Mitogen-activated protein kinase 3

168

2749

FYN

Proto-oncogene tyrosine-protein kinase Fyn

164

2758

GSK3beta

Glycogen synthase kinase 3 beta

164

2470

GSKgroup

Glycogen synthase kinases 3

157

1914

INS_R

Insulin receptor

132

1382

JNK1

c-Jun N-terminal kinase 1

196

1242

JNK2

c-Jun N-terminal kinase 2

196

1075

LCK

Lymphocyte-specific protein tyrosine kinase

220

2472

LKB1

Serine/threonine kinase 11 (LKB1)

433

1263

LYN

Tyrosine-protein kinase Lyn

202

1827

MAPKAPK2

mitogen-activated protein kinase-activated protein kinase 2

168

1807

MAPKgroup

P38, JNK and ERK

136

1914

PAK1

Serine/threonine-protein kinase PAK1

89

2647

PDK-1

3-phosphoinositide dependent protein kinase 1

268

1374

PKAalpha

Protein kinase, cAMP-dependent, catalytic, alpha

52

2749

PKAgroup

cAMP-dependent protein kinase

30

5037

PKBgroup

Protein kinases B

130

5890

PKCalpha

Protein kinase C, alpha type

72

2441

PKCbeta

Protein kinase C, beta 1

149

1531

PKCdelta

Protein kinase C, delta type

187

2414

PKCgroup

Protein kinase

30

2442

PKCzeta

Protein kinase C, zeta type

147

1242

PKGgroup

cGMP-dependent protein kinases

90

5037

PLK1

Polo like kinase 1

163

3418

ROCKgroup

Rho-associated, coiled-coil containing protein kinases

309

737

RSKgroup

Ribosomal protein S6 kinases

198

2647

SGKgroup

Serum/glucocorticoid regulated kinase

341

3144

SRC

Proto-oncogene tyrosine-protein kinase Src

101

4544

SYK

Tyrosine-protein kinase SYK (Spleen tyrosine kinase).

113

1290

P38alpha

mitogen-activated protein kinase 14

168

902

  1. Lmin and Lmax are the minimal and maximal values of the sequence length of proteins referred to the given class.