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Table 2 IAP values obtained by LOO CV for the training set

From: Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates

Kinase type Number of substrates Frame values
   10 15 20 25 30 35 40 45
ABL1 32 0.652 0.665 0.672 0.661 0.675 0.685 0.683 0.664
ATM 30 0.787 0.780 0.786 0.779 0.785 0.781 0.782 0.786
AURORA_A 12 0.747 0.732 0.743 0.792 0.784 0.773 0.769 0.744
AURORA_B 14 0.857 0.840 0.819 0.858 0.871 0.879 0.871 0.876
CAM_II_group 40 0.689 0.708 0.699 0.707 0.680 0.692 0.693 0.703
CAM_KII_alpha 21 0.616 0.592 0.591 0.531 0.532 0.528 0.519 0.529
CDK1 69 0.640 0.645 0.641 0.648 0.656 0.657 0.662 0.658
CDK2 28 0.767 0.747 0.754 0.761 0.753 0.748 0.730 0.725
CDKgroup 47 0.693 0.715 0.702 0.682 0.664 0.663 0.667 0.670
CK1alpha 11 0.578 0.553 0.575 0.609 0.625 0.642 0.594 0.560
CK1group 18 0.642 0.644 0.639 0.637 0.627 0.630 0.660 0.662
CK2group 122 0.745 0.740 0.735 0.746 0.742 0.737 0.742 0.748
DNA_PK 11 0.492 0.506 0.458 0.508 0.529 0.563 0.537 0.545
EGFR 27 0.840 0.843 0.883 0.861 0.893 0.887 0.891 0.888
ERK2 71 0.714 0.700 0.695 0.697 0.698 0.700 0.696 0.702
ERK1 61 0.655 0.639 0.634 0.632 0.632 0.631 0.622 0.634
FYN 25 0.687 0.697 0.695 0.696 0.651 0.627 0.619 0.632
GSK3beta 26 0.654 0.661 0.690 0.688 0.706 0.718 0.716 0.725
GSKgroup 20 0.650 0.640 0.664 0.616 0.589 0.592 0.557 0.566
INS_R 13 0.709 0.641 0.643 0.685 0.668 0.632 0.623 0.569
JNK1 20 0.762 0.773 0.754 0.766 0.783 0.770 0.777 0.779
JNK2 10 0.672 0.631 0.605 0.653 0.632 0.599 0.638 0.655
LCK 29 0.813 0.820 0.831 0.824 0.826 0.834 0.838 0.835
LKB1 16 0.996 0.995 0.994 0.994 0.993 0.989 0.990 0.991
LYN 26 0.751 0.771 0.743 0.722 0.705 0.706 0.711 0.712
MAPKAPK2 17 0.618 0.637 0.629 0.641 0.571 0.542 0.511 0.522
MAPKgroup 36 0.677 0.664 0.676 0.676 0.666 0.668 0.665 0.669
PAK1 21 0.500 0.517 0.570 0.573 0.569 0.575 0.576 0.541
PDK-1 24 0.957 0.958 0.956 0.957 0.955 0.948 0.949 0.950
PKAalpha 22 0.367 0.356 0.356 0.409 0.388 0.424 0.420 0.398
PKAgroup 206 0.658 0.660 0.669 0.668 0.672 0.648 0.646 0.648
PKBgroup 63 0.663 0.676 0.661 0.655 0.640 0.630 0.637 0.637
PKCalpha 81 0.663 0.653 0.656 0.643 0.646 0.649 0.656 0.653
PKCbeta 10 0.294 0.376 0.350 0.364 0.415 0.475 0.481 0.427
PKCdelta 17 0.418 0.472 0.449 0.490 0.489 0.463 0.479 0.493
PKCgroup 145 0.733 0.744 0.754 0.757 0.756 0.724 0.724 0.725
PKCzeta 11 0.643 0.626 0.668 0.701 0.736 0.746 0.743 0.733
PKGgroup 10 0.492 0.505 0.553 0.551 0.594 0.606 0.587 0.548
PLK1 18 0.678 0.628 0.670 0.718 0.731 0.721 0.688 0.704
ROCKgroup 12 0.828 0.852 0.862 0.856 0.866 0.872 0.880 0.889
RSKgroup 18 0.592 0.592 0.618 0.658 0.645 0.626 0.620 0.640
SGKgroup 11 0.738 0.749 0.699 0.695 0.699 0.699 0.699 0.683
SRC 92 0.731 0.732 0.740 0.742 0.742 0.738 0.746 0.745
SYK 21 0.741 0.729 0.752 0.766 0.775 0.764 0.744 0.750
P38alpha 24 0.726 0.720 0.723 0.737 0.741 0.728 0.705 0.717
Average   0.678 0.678 0.681 0.689 0.689 0.687 0.683 0.681