Skip to main content
Figure 4 | BMC Bioinformatics

Figure 4

From: A boundary delimitation algorithm to approximate cell soma volumes of bipolar cells from topographical data obtained by scanning probe microscopy

Figure 4

Overview of the various lengths, angles and points. A: The angle Θ defines the direction of a straight line y (x, Θ) through C90. The angle ϕ i (Θ) originates at C90 and is defined as the smallest angle between the line r i from C90 to the pixel P i and y (x, Θ). Aa and Ab illustrate the relation for P i located at opposite sides of C90. s i (ϕ) is defined as the arc of the circle with radius r i from y (x; Θ) to P i . B: The dimensions of the translated and rotated scan data based on the distances (dotted lines) of the vertices of the original scan to the straight lines through C90 in and perpendicular to the heading direction of the cell (straight lines). Note the increase in basal area caused by the rotation (see also Figure 11 and Figure 12).

Back to article page