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Figure 7 | BMC Bioinformatics

Figure 7

From: An effective approach for generating a three-Cys2His2 zinc-finger-DNA complex model by docking

Figure 7

Best Sp1-DNA complex model and detailed interaction scheme. (A) The best Sp1-DNA complex model generated on the basis of two AIRs in each domain. (B) The interacting residues in zinc fingers 1, 2 and 3 are cyan, magenta and orange, respectively. The interacting DNA bases are salmon. The solid lines and dotted lines indicate the hydrogen bonds and non-bond contacts, respectively. The residues and bases used as AIRs for docking are marked with an asterisk.

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