Table 1 List of S. aureus genomes used for comparing TOPSI and KPATH
From: A high-throughput pipeline for the design of real-time PCR signatures
Strain | Source | NCBI Taxon ID |
|---|---|---|
S. aureus subsp. aureus Mu50 | Refseq:NC_002758 | 158878 |
S. aureus subsp. aureus COL | Refseq:NC_002951 | 93062 |
S. aureus subsp. aureus JH1 | Refseq:NC_009632 | 359787 |
S. aureus subsp. aureus JH9 | Refseq:NC_009487 | 359786 |
S. aureus subsp. aureus MRSA252 | Refseq:NC_002952 | 282458 |
S. aureus subsp. aureus MSSA476 | Refseq:NC_002953 | 282459 |
S. aureus subsp. aureus Mu3 | Refseq:NC_009782 | 418127 |
S. aureus subsp. aureus MW2 | Refseq:NC_003923 | 196620 |
S. aureus subsp. aureus N315 | Refseq:NC_002745 | 158879 |
S. aureus subsp. aureus NCTC 8325 | Refseq:NC_007795 | 93061 |
S. aureus subsp. aureus str. Newman | Refseq:NC_009641 | 426430 |
S. aureus RF122 | Refseq:NC_007622 | 273036 |
S. aureus subsp. aureus USA300 FPR3757 | Refseq:NC_007793 | 451515 |
S. aureus subsp. aureus USA300 TCH1516 | Refseq:NC_010079 | 451156 |
S. aureus EMRSA15 draft sequence | Sanger Institute | N/A |
S. aureus 0582 draft sequence | Sanger Institute | N/A |
S. aureus subsp. aureus str. JKD6008 | Refseq:NZ_ABRZ00000000 | 546342 |
S. aureus subsp. aureus str. JKD6009 | Refseq:NZ_ABSA00000000 | 546343 |