Skip to main content

Advertisement

Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Table 2 Description of the factors extracted from the raw data and from the hatch and weight adjusted data

From: A factor model to analyze heterogeneity in gene expression

Factors extracted from the raw AF expression dataset
  Individual information Gene information
  hatch dam weight oligo size chip block chip row chip column
Factor 1 8.92E-05 0.139 0.129 2.20E-16 2.20E-16 0.074 0.179
Factor 2 0.074 0.913 4.70E-03 2.20E-16 2.20E-16 0.041 0.857
Factor 3 1.90E-02 0.848 0.489 2.55E-14 2.20E-16 0.716 0.376
Factor 4 6.00E-03 0.127 0.959 1.41E-07 2.20E-16 0.707 0.167
Factor 5 0.435 0.217 0.884 0.529 2.20E-16 4.97E-03 9.99E-05
Factor 6 0.946 0.412 0.615 1.79E-07 2.20E-16 0.876 5.11E-07
Factors extracted from the AF expression dataset adjusted for the hactch and body weight effects
  Individual information Gene information
  hatch dam Weight oligo size chip block chip row chip column
Factor 1 1.13E-04 0.219 0.156 2.20E-16 2.20E-16 0.078 0.209
Factor 2 0.052 0.841 3.40E-03 2.20E-16 2.20E-16 0.036 0.814
Factor 3 0.049 0.819 0.569 2.16E-11 2.20E-16 0.554 0.16
Factor 4 0.178 0.031 0.869 6.80E-09 2.20E-16 0.897 0.885
Factor 5 0.949 0.727 0.647 2.79E-12 2.20E-16 0.291 2.36E-10
  1. The p-value is given for each association test (see Methods section). Considering a threshold of 1%, the significant p-values are in bold.