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Table 1 Summary of reproducibility from two-sample Kolmogorov-Smirnov tests performed on the STAT1 ChIP-Seq data*.

From: HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data

Stimulated

Lanes

1:2

5:6

7:8

  

Significant

0

0

0

  

Unstimulated

Lanes

2:5

3:4

7:8

  

Significant

1

1

0

  

Stimulated vs unstimulated

Lanes

1:3

1:4

2:3

2:4

5:7

Significant

38

40

42

40

36

  1. *numbers displayed in the table are quantities of chromosome/strand combinations that show significant discrepancy when conducting the two-sample Kolmogorov-Smirnov test.
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BMC Bioinformatics

ISSN: 1471-2105

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