TY - JOUR AU - Shimomura, O. AU - Johnson, F. H. AU - Saiga, Y. PY - 1962 DA - 1962// TI - Extraction, purification and properties of aequorin, a bioluminescent protein from the luminous hydromedusan, Aequorea JO - J Cell Comp Physiol VL - 59 UR - https://doi.org/10.1002/jcp.1030590302 DO - 10.1002/jcp.1030590302 ID - Shimomura1962 ER - TY - JOUR AU - Paddock, S. PY - 2008 DA - 2008// TI - Over the rainbow: 25 years of confocal imaging JO - Biotechniques VL - 44 UR - https://doi.org/10.2144/000112798 DO - 10.2144/000112798 ID - Paddock2008 ER - TY - JOUR AU - Giepmans, B. N. G. AU - Adams, S. R. AU - Ellisman, M. H. AU - Tsien, R. Y. PY - 2006 DA - 2006// TI - The fluorescent toolbox for assessing protein location and function JO - Science VL - 312 UR - https://doi.org/10.1126/science.1124618 DO - 10.1126/science.1124618 ID - Giepmans2006 ER - TY - CHAP AU - Handley, D. A. ED - Hayat, M. A. PY - 1989 DA - 1989// TI - The development and application of colloidal gold as a microscopic probe BT - Colloidal Gold: Principles, Methods, and Applications PB - Academic Press CY - San Diego UR - https://doi.org/10.1016/B978-0-12-333927-0.50006-4 DO - 10.1016/B978-0-12-333927-0.50006-4 ID - Handley1989 ER - TY - JOUR AU - Hainfeld, J. F. AU - Powell, R. D. PY - 2000 DA - 2000// TI - New frontiers in gold labeling JO - J Histochem Cytochem VL - 48 UR - https://doi.org/10.1177/002215540004800404 DO - 10.1177/002215540004800404 ID - Hainfeld2000 ER - TY - JOUR AU - Peng, H. PY - 2008 DA - 2008// TI - Bioimage informatics: a new area of engineering biology JO - Bioinformatics VL - 24 UR - https://doi.org/10.1093/bioinformatics/btn346 DO - 10.1093/bioinformatics/btn346 ID - Peng2008 ER - TY - JOUR AU - Bozinov, D. AU - Rahnenfuhrer, J. PY - 2002 DA - 2002// TI - Unsupervised technique for robust target separation and analysis of DNA microarray spots through adaptive pixel clustering JO - Bioinformatics VL - 18 UR - https://doi.org/10.1093/bioinformatics/18.5.747 DO - 10.1093/bioinformatics/18.5.747 ID - Bozinov2002 ER - TY - JOUR AU - Rahnenfuhrer, J. AU - Bozinov, D. PY - 2004 DA - 2004// TI - Hybrid clustering for microarray image analysis combining intensity and shape features JO - BMC Bioinformatics VL - 5 UR - https://doi.org/10.1186/1471-2105-5-47 DO - 10.1186/1471-2105-5-47 ID - Rahnenfuhrer2004 ER - TY - JOUR AU - Mete, M. AU - Hennings, L. AU - Spencer, H. J. AU - Topaloglu, U. PY - 2009 DA - 2009// TI - Automatic identification of angiogenesis in double stained images of liver tissue JO - BMC Bioinformatics VL - 10 UR - https://doi.org/10.1186/1471-2105-10-S11-S13 DO - 10.1186/1471-2105-10-S11-S13 ID - Mete2009 ER - TY - JOUR AU - Berth, M. AU - Moser, F. M. AU - Kolbe, M. AU - Bernhardt, J. PY - 2007 DA - 2007// TI - The state of the art in the analysis of two-dimensional gel electrophoresis images JO - Appl Microbiol Biotechnol VL - 76 UR - https://doi.org/10.1007/s00253-007-1128-0 DO - 10.1007/s00253-007-1128-0 ID - Berth2007 ER - TY - CHAP AU - Gonzalez, R. C. AU - Woods, R. E. PY - 2008 DA - 2008// BT - Digital Image Processing PB - Prentice Hall CY - New Jersey ID - Gonzalez2008 ER - TY - BOOK PY - 2005 DA - 2005// TI - Handbook of Biomedical Image Analysis: Volume 2: Segmentation Models Part B PB - Springer-Verlag CY - New York ID - ref12 ER - TY - BOOK PY - 2000 DA - 2000// TI - Handbook of Medical Imaging: Processing and Analysis PB - Academic Press CY - San Diego ID - ref13 ER - TY - JOUR AU - van der Heijden, F. AU - Apperloo, W. AU - Spreeuwers, L. J. PY - 1997 DA - 1997// TI - Numerical optimisation in spot detector design JO - Pattern recognition letters VL - 18 UR - https://doi.org/10.1016/S0167-8655(97)00086-X DO - 10.1016/S0167-8655(97)00086-X ID - van der Heijden1997 ER - TY - JOUR AU - Blanford, R. P. AU - Tanimoto, S. L. PY - 1988 DA - 1988// TI - Bright-spot detection in pyramids JO - Comput Vis Graph Image Process VL - 43 UR - https://doi.org/10.1016/0734-189X(88)90058-8 DO - 10.1016/0734-189X(88)90058-8 ID - Blanford1988 ER - TY - JOUR AU - Olivo-Marin, J. -. C. PY - 2002 DA - 2002// TI - Extraction of spots in biological images using multiscale products JO - Pattern Recognition VL - 35 UR - https://doi.org/10.1016/S0031-3203(01)00127-3 DO - 10.1016/S0031-3203(01)00127-3 ID - Olivo-Marin2002 ER - TY - JOUR AU - Genovesio, A. AU - Liedl, T. AU - Emiliani, V. AU - Parak, W. J. AU - Coppey-Moisan, M. AU - Olivo-Marin, J. -. C. PY - 2006 DA - 2006// TI - Multiple particle tracking in 3-D + t microscopy: Method and application to the tracking of endocytosed quantum dots JO - IEEE Trans Image Process VL - 15 UR - https://doi.org/10.1109/TIP.2006.872323 DO - 10.1109/TIP.2006.872323 ID - Genovesio2006 ER - TY - JOUR AU - Zhang, B. AU - Fadili, J. AU - Starck, J. -. L. AU - Olivo-Marin, J. -. C. PY - 2007 DA - 2007// TI - Multiscale variance-stabilizing transform for mixed-Poisson-Gaussian processes and its applications in bioimaging JO - Proceedings of the IEEE International Conference on Image Processsing VL - 6 ID - Zhang2007 ER - TY - CHAP AU - Zeng, L. AU - Wu, W. PY - 2009 DA - 2009// TI - Motion Objects Detection Based on Wavelet Clustering BT - Proceedings of 2nd IEEE International Conference on Computer Science and Information Technology ID - Zeng2009 ER - TY - JOUR AU - Bao, W. AU - Zhou, R. AU - Yang, J. AU - Yu, D. AU - Li, N. PY - 2009 DA - 2009// TI - Anti-aliasing lifting scheme for mechanical vibration fault feature extraction JO - Mech Syst Signal Process VL - 23 UR - https://doi.org/10.1016/j.ymssp.2009.02.010 DO - 10.1016/j.ymssp.2009.02.010 ID - Bao2009 ER - TY - CHAP AU - Serra, J. PY - 1982 DA - 1982// BT - Image analysis and mathematical morphology PB - Academic Press CY - London ID - Serra1982 ER - TY - JOUR AU - Meyer, F. PY - 1979 DA - 1979// TI - Iterative image transformations for an automatic screening of cervical smears JO - J Histochem Cytochem VL - 27 UR - https://doi.org/10.1177/27.1.438499 DO - 10.1177/27.1.438499 ID - Meyer1979 ER - TY - JOUR AU - Bright, D. S. AU - Steel, E. B. PY - 1987 DA - 1987// TI - Two-dimensional top hat filter for extracting spots and spheres from digital images JO - J Microsc VL - 146 UR - https://doi.org/10.1111/j.1365-2818.1987.tb01340.x DO - 10.1111/j.1365-2818.1987.tb01340.x ID - Bright1987 ER - TY - JOUR AU - Breen, E. J. AU - Joss, G. H. AU - Williams, K. L. PY - 1991 DA - 1991// TI - Locating objects of interest within biological images: The top hat box filter JO - J Comput-Assist Microsc VL - 3 ID - Breen1991 ER - TY - CHAP AU - Angulo, J. PY - 2004 DA - 2004// TI - Mathematical morphology operators for reading radioactivity DNA array images BT - Proceedings of the IASTED International Conference on Visualization, Imaging, and Image Processing ID - Angulo2004 ER - TY - JOUR AU - Janson, M. E. AU - Setty, T. G. AU - Paoletti, A. AU - Tran, P. T. PY - 2005 DA - 2005// TI - Efficient formation of bipolar microtubule bundles requires microtubule-bound γ-tubulin complexes JO - J Cell Biol VL - 169 UR - https://doi.org/10.1083/jcb.200410119 DO - 10.1083/jcb.200410119 ID - Janson2005 ER - TY - CHAP AU - Meyer, F. ED - Chermant, J. L. PY - 1977 DA - 1977// TI - Contrast features extraction BT - Quantitative analysis of microstructures in material sciences, biology and medicine PB - Rieder Verlag CY - Stuttgart ID - Meyer1977 ER - TY - JOUR AU - Sternberg, S. R. PY - 1986 DA - 1986// TI - Grayscale morphology JO - Comput Vis Graph Image Process VL - 35 UR - https://doi.org/10.1016/0734-189X(86)90004-6 DO - 10.1016/0734-189X(86)90004-6 ID - Sternberg1986 ER - TY - JOUR AU - Manders, E. M. AU - Hoebe, R. AU - Strackee, J. AU - Vossepoel, A. M. AU - Aten, J. A. PY - 1996 DA - 1996// TI - Largest contour segmentation: a tool for the localization of spots in confocal images JO - Cytometry VL - 23 UR - https://doi.org/3.0.CO;2-L DO - 3.0.CO;2-L ID - Manders1996 ER - TY - JOUR AU - Giakoumis, I. AU - Nikolaidis, N. AU - Pitas, I. PY - 2006 DA - 2006// TI - Digital image processing techniques for the detection and removal of cracks in digitized paintings JO - IEEE Trans Image Process VL - 15 UR - https://doi.org/10.1109/TIP.2005.860311 DO - 10.1109/TIP.2005.860311 ID - Giakoumis2006 ER - TY - JOUR AU - Yang, Y. AU - Huang, S. AU - Rao, N. PY - 2008 DA - 2008// TI - An automatic hybrid method for retinal blood vessel extraction JO - Int J Appl Math Comput Sci VL - 18 UR - https://doi.org/10.2478/v10006-008-0036-5 DO - 10.2478/v10006-008-0036-5 ID - Yang2008 ER - TY - JOUR AU - Kapsalas, P. AU - Maravelaki-Kalaitzaki, P. AU - Zervakis, M. AU - Delegou, E. T. AU - Moropoulou, A. PY - 2008 DA - 2008// TI - A morphological fusion algorithm for optical detection and quantification of decay patterns on stone surfaces JO - Constr Building Mater VL - 22 UR - https://doi.org/10.1016/j.conbuildmat.2006.08.024 DO - 10.1016/j.conbuildmat.2006.08.024 ID - Kapsalas2008 ER - TY - JOUR AU - Kim, H. AU - Morgan, D. E. AU - Zeng, H. AU - Grizzle, W. E. AU - Warram, J. M. AU - Stockard, C. R. AU - Wang, D. AU - Zinn, K. R. PY - 2008 DA - 2008// TI - Breast tumor xenografts: diffusion-weighted MR imaging to assess early therapy with novel apoptosis-inducing anti-DR5 antibody JO - Radiology VL - 248 UR - https://doi.org/10.1148/radiol.2483071740 DO - 10.1148/radiol.2483071740 ID - Kim2008 ER - TY - JOUR AU - Ji, Q. AU - Engel, J. AU - Craine, E. PY - 2000 DA - 2000// TI - Texture analysis for classification of cervix lesions JO - IEEE Trans Med Imaging VL - 19 UR - https://doi.org/10.1109/42.896790 DO - 10.1109/42.896790 ID - Ji2000 ER - TY - JOUR AU - Stevenson, R. L. AU - Arce, G. R. PY - 1987 DA - 1987// TI - Morphological Filters: Statistical and Further Syntactic Properties JO - IEEE Trans Circuits and Systems VL - 34 UR - https://doi.org/10.1109/TCS.1987.1086067 DO - 10.1109/TCS.1987.1086067 ID - Stevenson1987 ER - TY - JOUR AU - Song, J. AU - Delp, E. J. PY - 1990 DA - 1990// TI - The analysis of morphological filters with multiple structuring elements JO - Comput Vis Graph Image Process VL - 50 UR - https://doi.org/10.1016/0734-189X(90)90150-T DO - 10.1016/0734-189X(90)90150-T ID - Song1990 ER - TY - JOUR AU - Smal, I. AU - Loog, M. AU - Niessen, W. AU - Meijering, E. PY - 2010 DA - 2010// TI - Quantitative comparison of spot detection methods in fluorescence microscopy JO - IEEE Trans Med Imaging VL - 29 UR - https://doi.org/10.1109/TMI.2009.2025127 DO - 10.1109/TMI.2009.2025127 ID - Smal2010 ER - TY - JOUR AU - Vincent, L. PY - 1993 DA - 1993// TI - Morphological grayscale reconstruction in image analysis: Applications and efficient algorithms JO - IEEE Trans Image Process VL - 2 UR - https://doi.org/10.1109/83.217222 DO - 10.1109/83.217222 ID - Vincent1993 ER - TY - JOUR AU - Jiang, S. AU - Zhou, X. AU - Kirchhausen, T. AU - Wong, S. T. C. PY - 2007 DA - 2007// TI - Detection of molecular particles in live cells via machine learning JO - Cytometry A VL - 71 UR - https://doi.org/10.1002/cyto.a.20404 DO - 10.1002/cyto.a.20404 ID - Jiang2007 ER - TY - CHAP AU - Soille, P. PY - 1999 DA - 1999// BT - Morphological Image Analysis: Principles and Applications PB - Springer-Verlag CY - Berlin UR - https://doi.org/10.1007/978-3-662-03939-7 DO - 10.1007/978-3-662-03939-7 ID - Soille1999 ER - TY - JOUR AU - Lacoste, T. D. AU - Michalet, X. AU - Pinaud, F. AU - Chemla, D. S. AU - Alivisatos, A. P. AU - Weiss, S. PY - 2000 DA - 2000// TI - Ultrahigh-resolution multicolor colocalization of single fluorescent probes JO - Proc Natl Acad Sci USA VL - 97 UR - https://doi.org/10.1073/pnas.170286097 DO - 10.1073/pnas.170286097 ID - Lacoste2000 ER - TY - JOUR AU - Smal, I. AU - Draegestein, K. AU - Galjart, N. AU - Niessen, W. AU - Meijering, E. PY - 2008 DA - 2008// TI - Particle filtering for multiple object tracking in dynamic fluorescence microscopy images: application to microtubule growth analysis JO - IEEE Trans Med Imaging VL - 27 UR - https://doi.org/10.1109/TMI.2008.916964 DO - 10.1109/TMI.2008.916964 ID - Smal2008 ER - TY - JOUR AU - Orlichenko, L. AU - Huang, B. AU - Krueger, E. AU - McNiven, M. A. PY - 2006 DA - 2006// TI - Epithelial growth factor-induced phosphorylation of caveolin 1 at tyrosine 14 stimulates caveolae formation in epithelial cells JO - J Biol Chem VL - 281 UR - https://doi.org/10.1074/jbc.M512088200 DO - 10.1074/jbc.M512088200 ID - Orlichenko2006 ER - TY - JOUR AU - Cheezum, M. K. AU - Walker, W. F. AU - Guilford, W. H. PY - 2001 DA - 2001// TI - Quantitative comparison of algorithms for tracking single fluorescent particles JO - Biophys J VL - 81 UR - https://doi.org/10.1016/S0006-3495(01)75884-5 DO - 10.1016/S0006-3495(01)75884-5 ID - Cheezum2001 ER - TY - JOUR AU - Kimori, Y. AU - Oguchi, Y. AU - Ichise, N. AU - Baba, N. AU - Katayama, E. PY - 2007 DA - 2007// TI - A procedure to analyze surface profiles of the protein molecules visualized by quick-freeze deep-etch replica electron microscopy JO - Ultramicroscopy VL - 107 UR - https://doi.org/10.1016/j.ultramic.2006.04.012 DO - 10.1016/j.ultramic.2006.04.012 ID - Kimori2007 ER -