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Table 1 Comparison between SLEP and LipoP

From: An automatic method for identifying surface proteins in bacteria: SLEP

 

TP

FP

FN

Gram +

   

LipoP

227

47

5

LipoP/SLEP

227

19

5

Gram -

   

LipoP

266

45

5

LipoP/SLEP

266

43

5

  1. Comparison of the accuracy of LipoP [30] ran on the whole set of proteins and on a reduced set after removing predicted transmembrane proteins with three or more helices according to the SLEP protocol.