Skip to main content

Table 3 Statistics of bacterial aaRS enzymes in Swiss-Prot data

From: Deriving enzymatic and taxonomic signatures of metagenomes from short read data

EC

# doublets

# triplets

# Proteins

% multiples

S61

6.1.1.1

18

0

474

3.80

 

6.1.1.2

3

0

125

2.40

 

6.1.1.3

1

0

616

0.16

x

6.1.1.4

2

0

703

0.28

x

6.1.1.5

10

0

524

1.91

x

6.1.1.6

60

3

527

12.52

 

6.1.1.7

1

0

628

0.16

x

6.1.1.9

0

0

293

0.00

x

6.1.1.10

2

0

421

0.48

x

6.1.1.11

4

0

735

0.54

x

6.1.1.12

2

0

688

0.29

x

6.1.1.13

68

1

172

40.70

 

6.1.1.14

276

0

825

33.45

 

6.1.1.15

10

0

762

1.31

x

6.1.1.16

14

0

691

2.03

x

6.1.1.17

114

0

808

14.11

 

6.1.1.18

0

0

139

0.00

x

6.1.1.19

4

0

675

0.59

x

6.1.1.20

251

0

877

28.62

 

6.1.1.21

6

0

627

0.96

x

6.1.1.22

1

0

256

0.39

x

  1. The column '%multiples' refers to the percentage of species that display multiple proteins with the same EC number. The sub-set S61, defined by x entries in the last column, is selected for taxonomic classification.