From: Global parameter estimation methods for stochastic biochemical systems
Parameters | Transcription processes | ||||
---|---|---|---|---|---|
 | ML | DFD-CDF | DFD-PDF | Bounds | True value |
k 1f | 0.4061 | 0.4082 | 0.4292 | [0,5] | 0.42 |
k 1b | 0.211 | 0.1171 | 0.8296 | [0,5] | 0.2485 |
k 2f | 74.1848 | 25.9882 | 99.7701 | [0,100] | 50 |
k 2b | 4.1423 | 18.8779 | 2.0815 | [0,20] | 10 |
k 3f | 3.2 × 10-3 | 3.87 × 10-3 | 0.0166 | [0,5] | 3.032 × 10-3 |
k 3b | 17.2405 | 19.9408 | 19.7665 | [0,20] | 10 |
α | 0.1 | 0.0183 | 0.0211 | [0,5] | 0.025 |
Irreversible processes | |||||
κ R | 0.8939 | 0.9296 | 0.8078 | [0,5] | 1 |
κ P | 2.0345 | 1.1103 | 1.0995 | [0,5] | 1 |
γ R | 7.3543 | 5.2431 | 5.4116 | [0,10] | 5 |
γ P | 0.0116 | 0.0124 | 0.012 | [0,5] | 0.0125 |
| 0.4376 | 0.4157 | 0.4152 | [0,5] | 0.417 |
| 1.7641 | 0.9755 | 1.3732 | [0,5] | 1 |
| 4.3235 | 2.9034 | 3.9315 | [0,10] | 3 |
| 0.0107 | 0.0116 | 0.0103 | [0,5] | 0.0125 |