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Figure 12 | BMC Bioinformatics

Figure 12

From: Automatic detection of anchor points for multiple sequence alignment

Figure 12

Screenshot of Jalview visualization of reference alignment for dataset BB50012. Jalview screenshot of the consistent partial columns for smin = 3 among one of the core regions of the BAliBASE reference alignment for dataset BB50012. The partial columns (shown in colour) correspond to parts of correct columns in a sufficient amount to correct the overall behaviour of ClustalW, resulting in a TC score of 44 (instead of 0). Notice the clear separation of the partial columns between eukaryotes and prokaryotes.

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