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Table 3 Specificity scores for ClustalW with anchor points on Balibase 3

From: Automatic detection of anchor points for multiple sequence alignment

Alignment

RV11

RV12

RV20

RV30

RV40

RV50

CLUSTALW 2.0

71.50/28.97

93.73/76.67

94.87/21.26

87.39/29.84

93.18/41.99

87.83/37.59

CW+c. pc. (6)

75.50/27.18

95.60/79.56

95.73/26.97

89.23/33.12

92.76/39.18

91.96/41.17

  1. The specificity scores obtained by Clustalw 2.0 for SP and TC evaluation schemes, as compared with the scores obtained with the consistent partial columns for smin = 6.