Fast and accurate protein substructure searching with simulated annealing and GPUs

BMC Bioinformatics

Table 4 ΔAUC relative to SA Tableau Search in the Fischer data set.

Difference in AUC relative to SA Tableau Search (4096 restarts) methods for all-against-all comparisons in the Fischer data set. The table is sorted by ΔAUC, so that methods with higher AUC than SA TableauSearch (ΔAUC < 0, with p-value < 0.05) are at the top of the table, and those with lower AUC than SA tableau search (ΔAUC > 0, with p-value < 0.05) are at the bottom of the table. Methods for which there is no statistically significant difference in AUC from SA Tableau Search (4096 restarts) at p-value 0.05 are shown in a single row with ΔAUC = 0.000.

ISSN: 1471-2105