From: Context dependent substitution biases vary within the human genome
 | 2 bp | 3 bp | 4 bp | 5 bp |
---|---|---|---|---|
Real data | Â | Â | Â | Â |
Transposon | 1.2622e-2 | 2.5405e-3 | 1.8575e-3 | 1.7409e-3 |
Transposon, near | 1.2981e-2 | 2.7622e-3 | 2.2495e-3 | 2.4520e-3 |
Transposon, far | 1.1799e-2 | 2.4298e-3 | 1.6990e-3 | 1.3874e-3 |
Non-repeat | 9.0816e-3 | 2.1532e-3 | 1.3989e-3 | 1.0385e-3 |
Non-repeat, near | 7.5286e-3 | 2.1473e-3 | 1.4786e-3 | 1.2069e-3 |
Non-repeat, far | 9.3789e-3 | 2.2102e-3 | 1.4290e-3 | 1.0287e-3 |
LINEs | 9.7298e-3 | 2.1798e-3 | 1.4683e-3 | 1.1465e-3 |
SINEs | 1.8042e-2 | 3.6693e-3 | 3.6117e-3 | 4.3391e-3 |
No-bias controls | Â | Â | Â | Â |
Transposon | 4.3907e-5 | 7.4125e-5 | 1.1806e-4 | 1.9323e-4 |
Transposon, near | 7.4565e-5 | 1.7935e-4 | 3.1243e-4 | 5.0755e-4 |
Transposon, far | 3.7193e-5 | 7.4758e-5 | 1.2081e-4 | 2.0596e-4 |
Non-repeat | 3.1367e-5 | 7.1670e-5 | 1.1779e-4 | 1.9054e-4 |
Non-repeat, near | 8.3869e-5 | 1.3339e-4 | 2.6857e-4 | 4.1832e-4 |
Non-repeat, far | 4.1651e-5 | 7.3881e-5 | 1.2627e-4 | 1.8502e-4 |
LINEs | 5.6367e-5 | 1.0365e-4 | 1.8279e-4 | 2.8490e-4 |
SINEs | 7.2458e-5 | 1.4746e-4 | 2.4695e-4 | 3.9894e-4 |