Skip to main content
Figure 7 | BMC Bioinformatics

Figure 7

From: Sigma-2: Multiple sequence alignment of non-coding DNA via an evolutionary model

Figure 7

Aligning two sequence fragments. When two sequence fragments A and B, containing two and three sequences respectively, are aligned, the likelihood of the sequences if all five sequences are related (calculated from treeAB) is compared with the likelihood of those sequences if sequences 1 and 2 are unrelated to sequences 3, 4 and 5, but sequences within each fragment are related (treeA, treeB). The likelihoods, and log-likelihood ratio, are calculated as described in the main text.

Back to article page
\