Gene
|
Enzyme
|
Organism
|
Accession Number
|
Reference
|
BLASTp e-value
|
Chosen enzymes for the probe design
|
phnA1a
|
Putative alpha subunit of ring-hydroxylating dioxygenase
|
Sphingomonas sp. CHY-1
|
Q65AT1
|
[24]
|
1e-40
|
B2Z3Z2, A2TC87, A4XDY3, 085843, A9Y004, B5L7S0, B5L7R9, Q1HCP6, Q7WUA0
|
phnA2a
|
Putative beta subunit of ring-hydroxylating dioxygenase
|
Sphingomonas sp. CHY-1
|
Q65AT0
|
[24]
|
1e-30
|
A2TC88, A4XDY2, 085842, B5L7R8
|
ahdA1c
|
Putative large subunit of oxygenase
|
Sphingomonas sp. P2
|
Q83VL2
|
[27, 32]
|
1e-40
|
A2TC29, A9XZZ2, Q65AS5
|
ahdA2c
|
Putative small subunit of oxygenase
|
Sphingomonas sp. P2
|
Q83VL1
|
[27, 32]
|
1e-30
|
A9XZZ3, Q65AS6, A4XDV1, 085992, A2TC30, Q9Z4T6
|
bphB
|
Putative 1,2-dihydrodiol-l,2-dihydroxy-dehydrogenase
|
Sphingobium xenophagum
|
Q9X9Q9
|
[25]
|
1e-40
|
Q14RW3, 085972
|
bphC
|
Putative biphenyl-2,3-diol 1,2-dioxygenase
|
Sphingobium xenophagum
|
P74836
|
[25]
|
1e-40
|
PI 1122, Q6LCU9, Q7DG81, A4XDU9, 085990, A9XZZ5, Q65AS8, Q9KWI2
|
bphA3
|
Putative ferredoxin component of dioxygenase
|
Sphingomonas yanoikuyae
|
A2TC31
|
[24, 32]
|
1e-20
|
034128, Q65AS7, A9XZZ4, A4XDV0, 085991, Q83VL0
|
ahdA4
|
Putative ferredoxin reductase component of dioxygenase
|
Sphingomonas yanoikuyae
|
A2TC59
|
[24, 32]
|
1e-40
|
Q83VI9, A4XDS3, 085962
|