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Table 3 Generalization performance

From: Predicting phenotypic traits of prokaryotes from protein domain frequencies

Phenotype sensitivity specificity harmonic mean aucROC aucPRC
Endospores 0.913 0.875 0.894 0.984 0.959
Gram stain 0.993 0.907 0.948 0.986 0.968
Motility 0.942 0.874 0.906 0.927 0.944
Oxygen Requirement 0.992 0.963 0.977 0.993 0.987
average 0.960 0.904 0.931 0.972 0.965
  1. Generalization performance using an independent test data set (for details see section "Methods"). The first column indicates the phenotype category, the remaining columns represent the prediction accuracy in terms of different performance measures. Here, "aucROC" and "aucPRC" correspond to "area under ROC curve" and "area under PRC curve", respectively.