Figure 11

ROC curves for selected genome context methods on the known-function gold standard set for ECK12 (all previous figures showed results for the sm-enzyme set). Parameters E = 10^-4, Q = 50 and a reference list of size 343 obtained by clustering are used to generate these scores. This figure is the same as Figure 8, changing only the set of gene pairs on which the methods are tested. Dashed lines correspond to normalized versions of the corresponding scores of the same-color line. The stars and squares correspond to the sensitivity and specificity obtained for each system when choosing the top 0.1% and 0.5% samples.