Figure 4
From: A systematic study of genome context methods: calibration, normalization and combination
ROC curves on the sm-enzyme gold standard set for ECK12 for the gene cluster method (gc), the gene fusion method (gf), the best gene neighbor method (gn-pval) and the best phylogenetic profile method (pp-wpval-with-runs). E = 10-4 and Q = 50 are used. The full list of reference genomes is used to generate all scores except pp-wpval-with-runs, for which a smaller list of size 216 obtained by clustering is used.