From: A systematic study of genome context methods: calibration, normalization and combination
short name | full name | #gen. | #w/fn. | #enz. | #samp. | %pos | weight |
---|---|---|---|---|---|---|---|
ECK12 | Escherichia coli K-12 substr. MG1655 | 4496 | 3185 | 1000 | 495510 | 0.621 | 1.000 |
EC157 | Escherichia coli O157:H7 EDL933 | 5475 | 1032 | 706 | 248865 | 1.327 | 0.884 |
ECCFT | Escherichia coli CFT073 | 5379 | 721 | 577 | 166176 | 0.968 | 0.856 |
SHIG | Shigella flexneri 2a str. 2457T | 4207 | 886 | 597 | 177310 | 1.020 | 0.795 |
VCHO | Vibrio cholerae O1 biovar El Tor str. N16961 | 3949 | 863 | 583 | 169653 | 1.244 | 0.528 |
CAULO | Caulobacter crescentus CB15 | 3818 | 919 | 615 | 188805 | 0.964 | 0.362 |
MTBC | Mycobacterium tuberculosis CDC1551 | 4235 | 760 | 569 | 161596 | 1.157 | 0.238 |
MTBR | Mycobacterium tuberculosis H37Rv | 3968 | 811 | 578 | 166753 | 1.409 | 0.238 |
FRANT | Francisella tularensis tularensis SCHU S4 | 1671 | 491 | 317 | 50086 | 1.512 | 0.230 |
HPY | Helicobacter pylori 26695 | 1609 | 415 | 228 | 25878 | 1.946 | 0.155 |