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Table 2 Summary of gene expression data explained by each type of aberration.

From: An integrated analysis of molecular aberrations in NCI-60 cell lines

layer

aberration

# explained genes validation

1

internal CNV

37

coverage 31.9% (37 of 116)

1

internal mutation

3

coverage 50% (3 of 6)

1

internal methylation

15

coverage 7.98% (15 of 188)

1

internal mRNA

46

coverage 68% (46 of 68)

2

internal segment CNV

2165

coverage 26.77% (2165 of 8067)

2

transcription factor

6

coverage 3.87% (6 of 155)

3

external segment CNV

1547

3 TFs examined, 2 verified

3

external mutation

392

1 TF examined and verified

3

external methylation

935

7 TFs examined, 1 verified