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Table 2 Properties of hand-curated yeast complexes from Wodak lab [29], MIPS [30] and Aloy [31]

From: MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure

    # Complexes of size  
Benchmark #Complexes # Proteins < 3 3-10 11-25 > 25 Avg density
Wodak 408 1627 172 204 27 5 0.639
MIPS 313 1225 106 138 42 27 0.412
Aloy 101 630 23 58 19 1 0.747