Benchmark | Method | PPI Network | #Predicted complexes | #Matched prediction | Precision | #Derivable benchmarks | #Derived benchmarks | Recall |
---|---|---|---|---|---|---|---|---|
Wodak | MCL | G+K | 242 | 55 | 0.226 | 182 | 62 | 0.338 |
 |  | ICD(G+K) | 136 | 68 | 0.500 | 153 | 76 | 0.497 |
 |  | FSW(G+K) | 120 | 69 | 0.575 | 153 | 78 | 0.510 |
 |  | Consol3.19 | 116 | 70 | 0.603 | 145 | 79 | 0.545 |
 |  | Boot0.094 | 203 | 76 | 0.374 | 172 | 85 | 0.494 |
 | MCL-CAw | G+K | 310 | 77 | 0.248 | 182 | 77 | 0.423 |
 |  | ICD(G+K) | 129 | 80 | 0.620 | 153 | 80 | 0.523 |
 |  | FSW(G+K) | 117 | 72 | 0.615 | 153 | 83 | 0.542 |
 |  | Consol3.19 | 122 | 82 | 0.672 | 145 | 82 | 0.566 |
 |  | Boot0.094 | 199 | 79 | 0.397 | 172 | 88 | 0.512 |
MIPS | MCL | G+K | 242 | 35 | 0.143 | 177 | 40 | 0.226 |
 |  | ICD(G+K) | 136 | 47 | 0.346 | 151 | 60 | 0.397 |
 |  | FSW(G+K) | 120 | 46 | 0.383 | 151 | 61 | 0.404 |
 |  | Consol3.19 | 116 | 48 | 0.414 | 157 | 63 | 0.401 |
 |  | Boot0.094 | 203 | 44 | 0.271 | 168 | 56 | 0.333 |
 | MCL-CAw | G+K | 310 | 53 | 0.171 | 177 | 53 | 0.300 |
 |  | ICD(G+K) | 129 | 63 | 0.488 | 151 | 63 | 0.417 |
 |  | FSW(G+K) | 117 | 48 | 0.410 | 151 | 66 | 0.437 |
 |  | Consol3.19 | 122 | 68 | 0.557 | 157 | 68 | 0.433 |
 |  | Boot0.094 | 199 | 47 | 0.236 | 168 | 59 | 0.351 |
Aloy | MCL | G+K | 242 | 43 | 0.179 | 76 | 42 | 0.556 |
 |  | ICD(G+K) | 136 | 58 | 0.426 | 75 | 56 | 0.747 |
 |  | FSW(G+K) | 120 | 57 | 0.475 | 75 | 57 | 0.760 |
 |  | Consol3.19 | 116 | 54 | 0.466 | 76 | 55 | 0.724 |
 |  | Boot0.094 | 203 | 56 | 0.276 | 76 | 55 | 0.724 |
 | MCL-CAw | G+K | 310 | 52 | 0.168 | 76 | 52 | 0.684 |
 |  | ICD(G+K) | 129 | 59 | 0.457 | 75 | 59 | 0.787 |
 |  | FSW(G+K) | 117 | 60 | 0.513 | 75 | 60 | 0.800 |
 |  | Consol3.19 | 122 | 57 | 0.467 | 76 | 57 | 0.750 |
 |  | Boot0.094 | 199 | 57 | 0.286 | 76 | 58 | 0.763 |