Skip to main content

Table 1 Anomalous microRNAs.

From: Geoseq: a tool for dissecting deep-sequencing datasets

 

miRBase id

Species

Libraries

Nature of Anomaly

remarks

1

hsa-miR-619

Human

SRR018353, SRR019624

misannotaton

m. on opp. strand

2

hsa-miR-1975

Human

SRR013571, SRR029124

misannotation

RNY5 ?

3

mmu-mir-546

Mouse

SRR034120, SRR014235

non-canonical

snoRNA ?

4

mmu-mir-1957

Mouse

SRR023850, GSM307159

misannotation

wrong mature

5

dme-mir-929

D.mel

SRR014278, SRR031696

misannotation

mature is star

  1. A list of microRNAs that have either another potential function or incorrectly identified mature and star sequences.
  2. These were analyzed by studying the distribution of reads over the pre-miRNA. (see also Figure 8).
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us