Figure 4

Comparison of SVM predicted and experimental binding specificities. A comparison of phage display determined and predicted PDZ domain binding specificities for the last five terminal binding positions visualized as sequence logos. For human, only domains with 10 or more peptides from phage display experiments by Tonikian et al. were compared. For worm and fly, domains with an adequate (five or more) number of peptides from protein microarray experiments by Chen et al. were compared.