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Table 2 The information for the designed CTPP primers for rs12449783 of the SLC6A4 gene

From: Confronting two-pair primer design for enzyme-free SNP genotyping based on a genetic algorithm

 

CTPP primer set for rs12449783

Length (bp)

GC%

T m

Tm-diff(°C)

Product size (bp)

Pf 1:

GATTATTAGTAGTTTCTGCA

20

30

50.96

  

Pr 1:

TTCTTTATGAATACCAGACG

20

35

51.37

Pf 1/Pr 1: 0.41

Pf 1/Pr 1: 228

Pf 2:

AGAAAGTTACAGACTAGCAA

20

30

51.37

Pf 2/Pr 2: 0.41

Pf 2/Pr 2: 105

Pr 2:

ATGTTTAATCTCTGAGAAGA

20

35

51.37

Pf 1/Pr 2: 0

Pf 1/Pr 2: 294

  1. The bold font represents a SNP.