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Table 2 Effectiveness of the approach on synthetic data

From: Comparative analysis of acute and chronic corticosteroid pharmacogenomic effects in rat liver: Transcriptional dynamics and regulatory structures

  pam mclust consclust
  # of sel. genes # of clusters + Accuracy*
(%)
# of sel. genes # of clusters Accuracy
(%)
# of sel. genes # of clusters Accuracy
(%)
Dataset 1 122 7|6 74.8|82.8 155 9|7 87.8|84.1 68 4|4 100|100
Dataset 2 337 6|6 100|100 343 6|6 100|100 330 6|6 100|100
Dataset 3 374 6|6 100|100 380 6|6 100|100 374 6|6 100|100
Dataset 4 376 15|7 68.8|94.6 375 13|7 80.1|94.2 302 11|7 80.9|92.4
  1. +: only clusters with more than 5 genes;*: the accuracy is estimated on the selected domain; the number of clusters and the accuracy are formatted as 'before merging' | 'after merging'