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Table 2 Correlation with known families

From: Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement

Family

Number

Size

ADH

MDR001

931 → 2217

CAD

MDR010, MDR021

520 → 661, 122

LTD

MDR002

427 → 774

TADH

MDR016, MDR020, MDR029

330 → 313, 128, 29

YHDH

MDR012

295 → 481

BPDH

MDR011

229 → 575

PDH

MDR005

218 → 328

TDH

MDR014

215 → 351

BurkDH

MDR041

67 → 114

MCAS, ACR

MDR003

58, 25 → 706

MECR

MDR007, MDR037

49 → 51, 20

VAT1

MDR008

39 → 50

QOR

MDR009

28 → 22

DOIAD

-

-

QORL

-

-

RT4I

-

-

  1. MDR families by name used in [1]. The CAD, TADH and MECR families are now represented by two or three HMMs, and the MCAS and ACR families are now incorporated into a single, much larger HMM. The DOIAD, QORL and RT4I1 families are not included in this study, because the amount of data available on these families is insufficient to satisfy the minimum inclusion size employed here.