From: Algorithm-driven Artifacts in median polish summarization of Microarray data
Sample size | Original arrays | Permutated arrays | ||||
---|---|---|---|---|---|---|
 | MAS5 | RMA | GCRMA | MAS5 | RMA | GCRMA |
2 | 0.7704 | 0.8113 | 0.7825 | 3.31-4 | 0.0456 | 0.1795 |
3 | 0.7721 | 0.8547 | 0.8524 | -9.88-5 | 0.7761 | 0.9144 |
4 | 0.7601 | 0.8220 | 0.8039 | -4.63-4 | 0.1154 | 0.2647 |
5 | 0.7604 | 0.8460 | 0.8432 | 3.01-5 | 0.4316 | 0.7140 |
6 | 0.7557 | 0.8144 | 0.7949 | -5.90-5 | 0.1086 | 0.2544 |
7 | 0.7584 | 0.8357 | 0.8212 | -1.09-5 | 0.2481 | 0.5436 |
8 | 0.7555 | 0.8210 | 0.7981 | 1.00-4 | 0.0913 | 0.2274 |
9 | 0.7529 | 0.8334 | 0.8125 | 3.46-5 | 0.1587 | 0.4140 |
10 | 0.7536 | 0.8163 | 0.8048 | 1.20-4 | 0.0757 | 0.1929 |
11 | 0.7536 | 0.8242 | 0.8097 | -1.01-4 | 0.1118 | 0.3170 |
12 | 0.7552 | 0.8156 | 0.8000 | 9.03-5 | 0.0637 | 0.1665 |
13 | 0.7523 | 0.8264 | 0.8061 | 1.85-5 | 0.0843 | 0.2546 |
14 | 0.7531 | 0.8154 | 0.8014 | 6.90-5 | 0.0547 | 0.1482 |
15 | 0.7537 | 0.8217 | 0.8087 | 2.82-5 | 0.0659 | 0.2048 |
16 | 0.7511 | 0.8146 | 0.8052 | 7.68-5 | 0.0467 | 0.1307 |
17 | 0.7511 | 0.8232 | 0.8062 | -6.80-5 | 0.0540 | 0.1654 |
18 | 0.7532 | 0.8159 | 0.8022 | -7.89-5 | 0.0411 | 0.1150 |
19 | 0.7546 | 0.8247 | 0.8059 | 9.65-6 | 0.0460 | 0.1418 |
20 | 0.7592 | 0.8228 | 0.8024 | 4.69-6 | 0.0364 | 0.1008 |
30 | 0.7602 | 0.8208 | 0.8022 | 3.09-5 | 0.0226 | 0.0620 |
50 | 0.7578 | 0.8233 | 0.8038 | 7.72-6 | 0.0124 | 0.0326 |
100 | 0.7543 | 0.8190 | 0.8023 | -2.41-8 | 0.0058 | 0.0157 |