The LabelHash algorithm for substructure matching

BMC Bioinformatics

Table 1 SOIPPA-derived Motifs

Template Structure	SOIPPA-derived LabelHash Motif	SOIPPA-aligned Structure(s)	p-value of LabelHash-computed match
1HQC	9^E, 10^YI, 11^IF, 12^GE, 13^Q, 169^LV, 171^QY, 172^GA	1ZTF	< 0.0009
1ECJ	367^D, 369^IV, 371^RT, 372^G, 373^TA, 374^T, 375^SL	1H3D	< 0.0005
1AYL	232^H, 250^ST, 251^G, 252^TS, 253^GA, 254^K, 255^TS, 256^T, 257^LT, 268^DG, 269^DE	1P9W	< 0.0006
1ZQ9	29^G, 50^ET, 51^LRKS, 52^DTEQ, 79^VLA	1CYD, 1D4D, 1UWK	< 0.0005

ISSN: 1471-2105