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Figure 4 | BMC Bioinformatics

Figure 4

From: An improved method for scoring protein-protein interactions using semantic similarity within the gene ontology

Figure 4

Correlation with gene expression and CESSM dataset. (a) Pearson correlation between gene expression similarity and semantic similarity on a S. cerevisiae dataset containing 5,000 randomly selected protein pairs are shown. (b - d) Correlation between semantic similarity and sequence, enzyme commission (EC), protein family (Pfam) similarity using the online CESSM tool. The evaluation was performed for cellular component (CC), biological process (BP), and molecular function (MF) ontologies of GO using maximum (MAX) approach for combining multiple GO annotations.

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BMC Bioinformatics

ISSN: 1471-2105

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