Skip to main content

Table 2 Improvement in F1 score for the S. cerevisiae PPI dataset

From: An improved method for scoring protein-protein interactions using semantic similarity within the gene ontology

Best-match average

Maximun

 

IEA-

  

IEA+

  

IEA-

  

IEA+

 

CC

BP

MF

CC

BP

MF

CC

BP

MF

CC

BP

MF

7.36

6.66

1.36

3.0

6.0

2.66

8.53

5.54

1.53

5.74

5.51

1.83

  1. Average improvement in F1 scores achieved by TCSS over Resnik for best-match average and maximum approaches. TCSS does 6 times better than Resnik for cellular component (CC), 5.9 times for biological process (BP), and 1.9 times for molecular function (MF) ontologies, on average.