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Table 2 Improvement in F1 score for the S. cerevisiae PPI dataset

From: An improved method for scoring protein-protein interactions using semantic similarity within the gene ontology

Best-match average Maximun
  IEA-    IEA+    IEA-    IEA+  
CC BP MF CC BP MF CC BP MF CC BP MF
7.36 6.66 1.36 3.0 6.0 2.66 8.53 5.54 1.53 5.74 5.51 1.83
  1. Average improvement in F1 scores achieved by TCSS over Resnik for best-match average and maximum approaches. TCSS does 6 times better than Resnik for cellular component (CC), 5.9 times for biological process (BP), and 1.9 times for molecular function (MF) ontologies, on average.