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Figure 8 | BMC Bioinformatics

Figure 8

From: Genome scale prediction of substrate specificity for acyl adenylate superfamily of enzymes based on active site residue profiles

Figure 8

Typical use of the query interface of pred_acs_substr for analysis of substrate specificity of ACSs. The prediction of substrate preference of the query sequence is based on two protocols, namely HMMER and PSSM-15. Each method provides the results in a tabular format, which are sorted based on the score of the query sequence against each subfamily. The two results are shown in separate pop-up windows. The last column in each table provides the link to the alignment of the query sequence with the template sequences of each subfamily.

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BMC Bioinformatics

ISSN: 1471-2105

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