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Table 3 Prediction of substrate preference by whole sequence HMMs and PSSM-15 method for enzymes having anomalous substrate specificity.

From: Genome scale prediction of substrate specificity for acyl adenylate superfamily of enzymes based on active site residue profiles

Protein

HMMER

PSSM-15

CG6178

Luciferase

Long chain:CoA ligase

At4 g05160 & At5 g63380

Coumarate:CoA Ligase

Long chain:CoA ligase

At1 g62940

Coumarate:CoA ligase

Long chain:CoA ligase

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BMC Bioinformatics

ISSN: 1471-2105

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