Figure 3From: Reticular alignment: A progressive corner-cutting method for multiple sequence alignmentComparison of alignment software on BAliBASE v1.0. Alignment accuracy of multiple alignment programs compared to that of RetAlign as measured on BAliBASE v1.0 using the provided bali_score tool (SP and TC scores are both shown). RetAlign was run with sequence weighting on, a single guide tree iteration and with a reticular threshold of 200. FSA was run in maximum sensitivity mode. MAFFT was run with the -auto switch and ClustalW with the default settings.Back to article page